| Port | Description |
|---|---|
| AcePerl | perl interface to the ACEDB database |
| bioperl | perl tools for bioinformatics |
| emboss | European Molecular Biology Open Software Suite |
| hmmer | profile HMMs for biological sequence analysis |
| p5-Bio-ASN1-EntrezGene | regular expression-based parser for NCBI Entrez Gene |
| p5-Bio-Cluster | cluster modules for BioPerl |
| p5-Bio-DB-EMBL | database object interface for EMBL entry retrieval |
| p5-Bio-DB-NCBIHelper | collection of routines useful for queries to NCBI databases |
| p5-Bio-Variation | bioperl variation-related functionality |
| py-biopython | Python tools for computational molecular biology |